Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

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Genes Targeted by hsa-mir-29b in SRS Ovarian Hendrix Cluster 69 Table contains all genes in the SRS Ovarian Hendrix cluster number 69. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-29b 54765 TRIM44 tripartite motif containing 44 [Source:HGNC Symbol;Acc:19016] zzz999 22888 UBOX5 U-box domain containing 5 [Source:HGNC Symbol;Acc:17777] zzz999 221154 EFHA1 EF-hand domain family, member A1 [Source:HGNC Symbol;Acc:31830] zzz999 11330 CTRC chymotrypsin C (caldecrin) [Source:HGNC Symbol;Acc:2523] zzz999 56978 PRDM8 PR domain containing 8 [Source:HGNC Symbol;Acc:13993] zzz999 7750 ZMYM2 zinc finger, MYM-type 2 [Source:HGNC Symbol;Acc:12989] zzz999 22850 ADNP2 ADNP homeobox 2 [Source:HGNC Symbol;Acc:23803] zzz999 115207 KCTD12 potassium channel tetramerisation domain containing 12 [Source:HGNC Symbol;Acc:14678] zzz999 54556 ING3 inhibitor of growth family, member 3 [Source:HGNC Symbol;Acc:14587] T 54905 CYP2W1 cytochrome P450, family 2, subfamily W, polypeptide 1 [Source:HGNC Symbol;Acc:20243] zzz999 1828 DSG1 desmoglein 1 [Source:HGNC Symbol;Acc:3048] zzz999 5770 PTPN1 protein tyrosine phosphatase, non-receptor type 1 [Source:HGNC Symbol;Acc:9642] P T 4139 MARK1 MAP/microtubule affinity-regulating kinase 1 [Source:HGNC Symbol;Acc:6896] zzz999 7047 TGM4 transglutaminase 4 (prostate) [Source:HGNC Symbol;Acc:11780] zzz999 10243 GPHN gephyrin [Source:HGNC Symbol;Acc:15465] zzz999 79845 RNF122 ring finger protein 122 [Source:HGNC Symbol;Acc:21147] T 3146 HMGB1 high mobility group box 1 [Source:HGNC Symbol;Acc:4983] zzz999 23527 ACAP2 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 [Source:HGNC Symbol;Acc:16469] zzz999 54916 C14orf101 chromosome 14 open reading frame 101 [Source:HGNC Symbol;Acc:20185] zzz999 1997 ELF1 E74-like factor 1 (ets domain transcription factor) [Source:HGNC Symbol;Acc:3316] zzz999 2898 GRIK2 glutamate receptor, ionotropic, kainate 2 [Source:HGNC Symbol;Acc:4580] zzz999 10877 CFHR4 complement factor H-related 4 [Source:HGNC Symbol;Acc:16979] zzz999 1667 DEFA1B defensin, alpha 1B [Source:HGNC Symbol;Acc:33596] zzz999 6169 RPL38 ribosomal protein L38 [Source:HGNC Symbol;Acc:10349] zzz999 56341 PRMT8 protein arginine methyltransferase 8 [Source:HGNC Symbol;Acc:5188] zzz999 7757 ZNF208 zinc finger protein 208 [Source:HGNC Symbol;Acc:12999] zzz999 64778 FNDC3B fibronectin type III domain containing 3B [Source:HGNC Symbol;Acc:24670] zzz999 55326 AGPAT5 1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon) [Source:HGNC Symbol;Acc:20886] zzz999 284266 SIGLEC15 sialic acid binding Ig-like lectin 15 [Source:HGNC Symbol;Acc:27596] zzz999 7357 UGCG UDP-glucose ceramide glucosyltransferase [Source:HGNC Symbol;Acc:12524] zzz999 10955 SERINC3 serine incorporator 3 [Source:HGNC Symbol;Acc:11699] T 79982 DNAJB14 DnaJ (Hsp40) homolog, subfamily B, member 14 [Source:HGNC Symbol;Acc:25881] zzz999 1428 CRYM crystallin, mu [Source:HGNC Symbol;Acc:2418] zzz999 55847 CISD1 CDGSH iron sulfur domain 1 [Source:HGNC Symbol;Acc:30880] zzz999 22878 TRAPPC8 trafficking protein particle complex 8 [Source:HGNC Symbol;Acc:29169] zzz999 2979 GUCA1B guanylate cyclase activator 1B (retina) [Source:HGNC Symbol;Acc:4679] zzz999 133619 PRRC1 proline-rich coiled-coil 1 [Source:HGNC Symbol;Acc:28164] zzz999 6372 CXCL6 chemokine (C-X-C motif) ligand 6 (granulocyte chemotactic protein 2) [Source:HGNC Symbol;Acc:10643] zzz999 23049 SMG1 SMG1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans) [Source:HGNC Symbol;Acc:30045] zzz999 64710 NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 [Source:HGNC Symbol;Acc:29923] zzz999 23013 SPEN spen homolog, transcriptional regulator (Drosophila) [Source:HGNC Symbol;Acc:17575] P T 2696 GIPR gastric inhibitory polypeptide receptor [Source:HGNC Symbol;Acc:4271] zzz999 80143 SIKE1 suppressor of IKBKE 1 [Source:HGNC Symbol;Acc:26119] P 54505 DHX29 DEAH (Asp-Glu-Ala-His) box polypeptide 29 [Source:HGNC Symbol;Acc:15815] zzz999 7019 TFAM transcription factor A, mitochondrial [Source:HGNC Symbol;Acc:11741] zzz999 79684 C11orf61 chromosome 11 open reading frame 61 [Source:HGNC Symbol;Acc:26266] zzz999 55317 C20orf29 chromosome 20 open reading frame 29 [Source:HGNC Symbol;Acc:15875] zzz999 1005 CDH7 cadherin 7, type 2 [Source:HGNC Symbol;Acc:1766] zzz999 78988 MRP63 mitochondrial ribosomal protein 63 [Source:HGNC Symbol;Acc:14514] T 2186 BPTF bromodomain PHD finger transcription factor [Source:HGNC Symbol;Acc:3581] zzz999 56061 UBFD1 ubiquitin family domain containing 1 [Source:HGNC Symbol;Acc:30565] P 51566 ARMCX3 armadillo repeat containing, X-linked 3 [Source:HGNC Symbol;Acc:24065] zzz999 3842 TNPO1 transportin 1 [Source:HGNC Symbol;Acc:6401] zzz999 3736 KCNA1 potassium voltage-gated channel, shaker-related subfamily, member 1 (episodic ataxia with myokymia) [Source:HGNC Symbol;Acc:6218] zzz999 811 CALR calreticulin [Source:HGNC Symbol;Acc:1455] zzz999 26285 CLDN17 claudin 17 [Source:HGNC Symbol;Acc:2038] zzz999 11127 KIF3A kinesin family member 3A [Source:HGNC Symbol;Acc:6319] zzz999 80185 C8orf41 chromosome 8 open reading frame 41 [Source:HGNC Symbol;Acc:26262] zzz999 26191 PTPN22 protein tyrosine phosphatase, non-receptor type 22 (lymphoid) [Source:HGNC Symbol;Acc:9652] zzz999 92483 LDHAL6B lactate dehydrogenase A-like 6B [Source:HGNC Symbol;Acc:21481] zzz999 4040 LRP6 low density lipoprotein receptor-related protein 6 [Source:HGNC Symbol;Acc:6698] P T 64208 POPDC3 popeye domain containing 3 [Source:HGNC Symbol;Acc:17649] zzz999 2290 FOXG1 forkhead box G1 [Source:HGNC Symbol;Acc:3811] zzz999 5611 DNAJC3 DnaJ (Hsp40) homolog, subfamily C, member 3 [Source:HGNC Symbol;Acc:9439] zzz999 2671 GFER growth factor, augmenter of liver regeneration [Source:HGNC Symbol;Acc:4236] zzz999 51233 C22orf43 chromosome 22 open reading frame 43 [Source:HGNC Symbol;Acc:28031] zzz999 66008 TRAK2 trafficking protein, kinesin binding 2 [Source:HGNC Symbol;Acc:13206] T 2637 GBX2 gastrulation brain homeobox 2 [Source:HGNC Symbol;Acc:4186] zzz999 23405 DICER1 dicer 1, ribonuclease type III [Source:HGNC Symbol;Acc:17098] P 3839 KPNA3 karyopherin alpha 3 (importin alpha 4) [Source:HGNC Symbol;Acc:6396] zzz999 6865 TACR2 tachykinin receptor 2 [Source:HGNC Symbol;Acc:11527] zzz999 4654 MYOD1 myogenic differentiation 1 [Source:HGNC Symbol;Acc:7611] P 9771 RAPGEF5 Rap guanine nucleotide exchange factor (GEF) 5 [Source:HGNC Symbol;Acc:16862] zzz999 10905 MAN1A2 mannosidase, alpha, class 1A, member 2 [Source:HGNC Symbol;Acc:6822] zzz999 10612 TRIM3 tripartite motif containing 3 [Source:HGNC Symbol;Acc:10064] zzz999 6769 STAC SH3 and cysteine rich domain [Source:HGNC Symbol;Acc:11353] zzz999 5868 RAB5A RAB5A, member RAS oncogene family [Source:HGNC Symbol;Acc:9783] zzz999 7135 TNNI1 troponin I type 1 (skeletal, slow) [Source:HGNC Symbol;Acc:11945] zzz999 1089 CEACAM4 carcinoembryonic antigen-related cell adhesion molecule 4 [Source:HGNC Symbol;Acc:1816] zzz999 51458 RHCG Rh family, C glycoprotein [Source:HGNC Symbol;Acc:18140] zzz999 8687 KRT38 keratin 38 [Source:HGNC Symbol;Acc:6456] zzz999 9228 DLGAP2 discs, large (Drosophila) homolog-associated protein 2 [Source:HGNC Symbol;Acc:2906] P T 6635 SNRPE small nuclear ribonucleoprotein polypeptide E [Source:HGNC Symbol;Acc:11161] zzz999 7003 TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) [Source:HGNC Symbol;Acc:11714] T 6531 SLC6A3 solute carrier family 6 (neurotransmitter transporter, dopamine), member 3 [Source:HGNC Symbol;Acc:11049] zzz999

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